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Examples of using PhyloFactor and DEICODE to analyze microbiome datasets.

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Factorization of microbiome datasets

This repo was created to exemplify how to use two factorization methods on microbiome datasets. Also, to generate a Random Forest model from them. The codes of these examples were generated during my lab rotation at Rob Knight's Lab - Spring 2019.

Here, you can find examples of using PhyloFactor and DEICODE to analyze a previously published study.

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