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Pull requests: dpryan79/MethylDackel

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Pull requests list

add all context to perread
#160 by Javkhaa was closed Jun 21, 2024 Loading…
Devel
#156 by abcoxyzide was closed Feb 13, 2024 Loading…
Fix end trimming off-by-one that caused overflow into qual and seq
#144 by limwz01 was merged Jul 5, 2023 Loading…
2
Fix wrong mapping position used for overlap computation
#143 by limwz01 was merged Jun 20, 2023 Loading…
1
do not recompile on "make test" and "make install"
#130 by zemu-unile was merged Jan 21, 2022 Loading…
Corrects invalid link
#126 by bwlang was merged Oct 6, 2021 Loading…
implement #122, the --ignoreNH option
#125 by dpryan79 was merged Sep 27, 2021 Loading…
1
adds mappability to readme
#124 by bwlang was merged Sep 27, 2021 Loading…
Fixed segfault with mappability filtering, minor fixes.
#120 by Valiec was merged Jul 22, 2021 Loading…
2
Implement #61, allow filtering by non-CpG conversion efficiency. Also…
#119 by dpryan79 was merged Jul 22, 2021 Loading…
Fix #117, bump version to 0.5.3
#118 by dpryan79 was merged Jun 27, 2021 Loading…
1
Reimplement pileup overlap detection
#113 by dpryan79 was merged Feb 28, 2021 Loading…
1
Fix issue 93
#96 by dpryan79 was merged May 23, 2020 Loading…
Fix issue 88
#91 by dpryan79 was merged Jan 30, 2020 Loading…
Fixing typo
#89 by wdecoster was merged Jan 30, 2020 Loading…
1
see if this fixes the CI
#87 by dpryan79 was closed Jan 30, 2020 Loading…
[WIP] Adding the ability to filter reads by Bismap mappability
#80 by Valiec was merged Jul 31, 2019 Loading…
8
Fix #58
#77 by dpryan79 was merged Apr 13, 2019 Loading…
No CI outside of [0, 1]
#76 by dpryan79 was merged Apr 13, 2019 Loading…
1
External htslib
#75 by dpryan79 was merged Apr 12, 2019 Loading…
added limits.h to resolve MAX_INT on osx
#72 by hillst was merged Apr 4, 2019 Loading…
1
External htslib
#71 by dpryan79 was merged Mar 14, 2019 Loading…
Per read metrics
#70 by dpryan79 was merged Mar 12, 2019 Loading…
Implement --cytosine_report
#51 by dpryan79 was merged Sep 12, 2017 Loading…
Updates README.md with which strand contains information
#49 by bwlang was closed Jun 14, 2018 Loading…
1
4
ProTip! Updated in the last three days: updated:>2024-09-30.