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FSPLS-publication-repo Public
Code, data, and outputs to reproduce the results of FS-PLS benchmarking publication
R GNU General Public License v3.0 UpdatedNov 14, 2024 -
CITE-Seq-Pred Public
Model building code for attempted prediction of single-cell surface proteins from scRNA-Seq data
Python MIT License UpdatedOct 1, 2024 -
bespoke_interaction_analysis Public
Manually curate a list of putative cell-cell interactions in single-cell data using the CellChat database
R GNU General Public License v3.0 UpdatedAug 19, 2024 -
fspls-benchmark Public
Files to reproduce benchmarking analysis of the FS-PLS feature selection method
UpdatedSep 15, 2023 -
nextflow-pipes Public
Misc NF pipes for development. Will be distributed elsewhere.
Nextflow UpdatedFeb 3, 2023 -
tombo Public
Forked from nanoporetech/tomboTombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data.
Python Other UpdatedMar 11, 2021 -
SARS-CoV-2_Mods Public
Contains scripts for SC2 modification analysis in Coin Group paper
R UpdatedNov 19, 2020 -
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RecurM Public
Detecting repeatedly assembled genomic units in metagenome data
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Assembly-Dereplicator Public
Forked from rrwick/Assembly-DereplicatorA tool for removing redundant genomes from a set of assemblies
Python GNU General Public License v3.0 UpdatedNov 28, 2019 -
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