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  1. cfDNA_AnalysisPipeline cfDNA_AnalysisPipeline Public

    Analysis of cfDNA data with UMIs (consensus generation, SNV calling, annotation and evaluation of fragment length profiles)

    Python 8 1

  2. singleCellClassification singleCellClassification Public

    Single cell classification and feature engineering using DREMI scores

    R 4

  3. duplexFiltering duplexFiltering Public

    duplex DNA molecule identification tool for ultra-sensitive SNV detection

    Python 3 2

  4. AmpliSolve AmpliSolve Public

    Identification of single nucleotide variants using position-specific error estimation in deep sequencing data

    C++ 2 2

  5. IMC_DataAnalysis IMC_DataAnalysis Public

    Simple workflow for IMC data exploration, annotation and visualisation of single-cells

    R 1

  6. NerveHostspotDetector NerveHostspotDetector Public

    Process IMC data at the pixel level and detect hotspots.