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Source code and examples for AlphaFold Unmasked

Python 22 3 Updated May 13, 2024
Jupyter Notebook 2 3 Updated Apr 18, 2024

PINDER: The Protein INteraction Dataset and Evaluation Resource

Python 49 1 Updated Jul 23, 2024

Protein Ligand INteraction Dataset and Evaluation Resource

Python 85 2 Updated Jul 25, 2024

Integrating diagramming and data visualization

Jupyter Notebook 27 Updated Jul 25, 2024

web based visualisation of molecular interaction data

JavaScript 12 5 Updated Jul 18, 2024
Python 983 103 Updated Jul 25, 2024

Notify me, Julia! I cannot remember after executing the script!!

Julia 15 2 Updated Jul 26, 2021

Easily benchmark a Julia package over its commit history

Julia 91 5 Updated Jun 18, 2024

Fast AlphaFold-Multimer based pipeline for Protein-Protein Interaction (PPI) screening

Python 20 2 Updated Jul 8, 2024

NeuralPLexer: State-specific protein-ligand complex structure prediction with a multi-scale deep generative model

Jupyter Notebook 236 64 Updated Apr 21, 2024

🌐 The Internet OS! Free, Open-Source, and Self-Hostable.

JavaScript 22,056 1,398 Updated Jul 26, 2024
Jupyter Notebook 10 1 Updated Aug 3, 2023

A library of free open source icons for science illustrations in biology and chemistry

Vue 1,246 69 Updated Jul 25, 2024
Python 3 2 Updated May 30, 2024
C++ 8 Updated May 16, 2024

GTalign, HPC protein structure alignment, superposition and search (alpha release)

Cuda 19 2 Updated Jul 9, 2024

Protein-ligand structure prediction

Jupyter Notebook 169 16 Updated Jun 3, 2024

Deep networks for protein functional inference

Jupyter Notebook 155 26 Updated Jun 17, 2024

Structural Python (Back) Calculator Interface for PDBs

Python 6 4 Updated Jan 12, 2024

Build conformational representations of Intrinsically Disordered Proteins and Regions by a guided sampling of the protein torsion space

Python 17 6 Updated May 23, 2024

Beta Machine Learning Toolkit

Julia 92 14 Updated Jul 17, 2024

List of papers about Proteins Design using Deep Learning

1,254 160 Updated Jul 25, 2024

AlphaFold Meets Flow Matching for Generating Protein Ensembles

Python 302 43 Updated Jun 20, 2024

Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n for

R 16 3 Updated Jun 26, 2024

The missing star history graph of GitHub repos - https://star-history.com

TypeScript 6,165 253 Updated Jul 4, 2024

Simple command-line argument parsing for Julia

Julia 11 Updated Apr 17, 2024

Scientific Computing and (Big) Data Analysis with Julia

TeX 13 Updated Feb 26, 2024

Pretty printing in Julia without all that annoying "writing code" business

Julia 6 Updated Jan 31, 2024
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