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COBY (Coarse Grained System Builder) can be used to create coarse-grained systems in Martini 3

Python 20 3 Updated Aug 28, 2024

Collection of examples for OpenGL: Perlin noise, ambient occlusion, shadow mapping, water reflection and others

C++ 234 43 Updated Apr 27, 2023
Jupyter Notebook 8 7 Updated Aug 23, 2023

OpenMM plugin to define forces with neural networks

C++ 180 23 Updated Aug 23, 2024

End-To-End Molecular Dynamics (MD) Engine using PyTorch

Python 556 75 Updated Oct 10, 2024

All Algorithms implemented in Python

Python 191,014 45,143 Updated Oct 8, 2024

Resoruce to help you to prepare for your comming data science interviews

986 211 Updated Oct 1, 2024

🏆 A ranked list of awesome machine learning Python libraries. Updated weekly.

16,328 2,361 Updated Oct 10, 2024

A curated list of data science educational resources for essential data science skills

459 107 Updated Dec 6, 2023

A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files

Python 169 65 Updated Oct 10, 2019

Resources, Code, and Other things I use to teach Cheminformatics.

Rich Text Format 136 10 Updated Sep 13, 2024

Repository for storing and tracking my self-study progress.

Jupyter Notebook 208 65 Updated Feb 7, 2021

a VMD plugin for binding affinity prediction using end-point free energy methods

Tcl 27 14 Updated Apr 23, 2016

DLSCORE: A deep learning based scoring function for predicting protein-ligand binding affinity

Python 49 19 Updated Mar 24, 2023
Jupyter Notebook 7 8 Updated Mar 28, 2019

Quimioteca nacional

CSS 1 Updated Dec 8, 2022

A document for the Living Journal of Computational Molecular Science (LiveCoMS) which describes basic training for molecular simulations (oriented towards molecular dynamics (MD)), providing some t…

TeX 1 Updated Dec 29, 2018

A document for the Living Journal of Computational Molecular Science (LiveCoMS) which describes basic training for molecular simulations (oriented towards molecular dynamics (MD)), providing some t…

TeX 109 19 Updated Dec 29, 2018

Useful tools written for Gaussian (an electronic structure program for computational chemistry)

Shell 28 8 Updated Apr 20, 2017

super-simple command-line todo tracking

Shell 13 8 Updated Mar 29, 2016