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Lists (25)
Alignment
Alignment tools14 repositories
Annotation
Tools for genome annotation30 repositories
Assembly
Tools for genome assembly45 repositories
Bacteria
Specific tools for bacteria related analyses19 repositories
G4
Quadruplex related tools5 repositories
longReads
Tools for long reads14 repositories
Mapping
Reads mapping tools14 repositories
Metagenomics
14 repositories
Misc tools
61 repositories
ML
Machine Learning related repos3 repositories
Mycobacteria
Niche tools for mycobacteria analysis28 repositories
Pangenome
Tools related to pan- and coregenome analysis15 repositories
Phage
Niche tools for phages and viruses31 repositories
Phylogeny
Tools for phylogeny35 repositories
Programs
10 repositories
Python
Python and Jupyter stuff21 repositories
R
R related repos18 repositories
Reads
Tools for reads processing23 repositories
RNA
RNAseq related tools36 repositories
Snakemake
Snakemake related repos2 repositories
Statistics
2 repositories
Taxonomy
Taxonomy related tools8 repositories
Terminal
Terminal related stuff28 repositories
Variants
Variant calling and manipulation tools68 repositories
Visualization
Visualization tools93 repositories
Starred repositories
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