Computational analysis of raw-formatted mass spectrometry data in R. Brings your Orbitrap data to life!

a streamlining post Spectronaut™ DIA-MS data analysis R package

An application for dorsal fin image recognition and cataloguing

Python client for PRIDE Archive Rest API.

FastAPI framework, high performance, easy to learn, fast to code, ready for production

MS queue generator

mzmine source code repository

🐚 Python-powered shell. Full-featured and cross-platform.

A cross-platform, OpenGL terminal emulator.

Train-the-trainer handbook for making training materials FAIR

Reads Thermo SLD (sequence) files that contain the information about the sequence of mass spectrometry runs.

Open source code for AlphaFold.

Proteomics search & quantification so fast that it feels like magic

Python package to create multi-well plate layouts for specimen sample data. Automatically distributes quality control samples according to scheme in config file.

QuPath - Open-source bioimage analysis for research

Koina R client

Inspired by @veltman's command-line mystery, use SQL to research clues and find out whodunit!

Interactive data visualizations and plotting in Julia

A new markup-based typesetting system that is powerful and easy to learn.

An modular and extensible app for visualization of mass spectrometry data and optimization of data acquisition.

Get up and running with Llama 3.2, Mistral, Gemma 2, and other large language models.

Handy code shared in the FMI CompBio group

Visualise Clusterings at Different Resolutions

collection of c4l proteome informatics related material

This repo is for experimentation and exploring new ideas that may or may not make it into the main dotnet/runtime repo.

Pyodide is a Python distribution for the browser and Node.js based on WebAssembly

Brings Orbitrap mass spectrometry data to life; multi-platform, fast and colorful R package

Cyrus IMAP is an email, contacts and calendar server