create conda environment first if needed
#just need for first time
conda create -f environment.yml
conda activate mrisimpyMagnetic Resonance Imaging (MRI) Simulation Code in Python
add epg to $PYHTONPATH:
export PYTHONPATH=$PWD:${PYTHONPATH}Gradient descent on flip angles
python cpmg-prop.py --max_iter 1000 --max_power 153.53 --step .1 --verbose --esp 4.8 --etl 35 --T1 1000 --T2 100 --TR 1000 --output_state test3.pickle --output_angles angles3.txt --input_angles /home/jtamir/t2shuffling-data/2018-05-18_t2sh_varFR_manual_flip/18May18_Ex6842_Ser8/flipangles.txt