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DESCRIPTION
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DESCRIPTION
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Package: beyondcell
Type: Package
Title: A Tool for the Analysis of Tumour Therapeutic Heterogeneity in
single-cell RNA-seq
Version: 1.0.0
Authors@R: c(person("Coral", "Fustero-Torre", email = "[email protected]",
role = "aut"), person("Maria Jose", "Jimenez-Santos",
email = "[email protected]", role = c("aut", "cre")), person("Santiago",
"Garcia-Martin", email = "[email protected]", role = "ctb"), person("Carlos",
"Carretero-Puche", email = "[email protected]", role = "ctb"),
person("Luis", "Garcia-Jimeno", email = "[email protected]", role = "ctb"),
person("Tomas", "Di Domenico", email = "[email protected]", role = "ctb"),
person("Gonzalo", "Gomez-Lopez", email = "[email protected]", role = "ths"),
person("Fatima", "Al-Shahrour", email = "[email protected]", role = "ths"))
Description: Beyondcell computes a score summarizing the cell-based drug
sensitivity for each cell in your experiment and a subset of drugs of
interest. It also includes functions to prioritize drugs based on these scores
and visualize the results.
URL:
https://gitlab.com/bu_cnio/beyondcell,
https://beyondcell.bioinformatics.cnio.es
Depends: R (>= 4.0.0)
License: GPL-2
Encoding: UTF-8
LazyData: true
Imports:
bnstruct (>= 1.0.8),
cowplot (>= 1.1.0),
gdata (>= 2.18.0),
ggplot2 (>= 3.3.2),
ggrepel (>= 0.8.2),
patchwork (>= 1.0.1),
plyr (>= 1.8.6),
qusage (>= 2.22.0),
RColorBrewer (>= 1.1-2),
scales (>= 1.1.1),
see (>= 0.6.0),
Seurat (>= 3.2.2),
useful (>= 1.2.6),
viridis (>= 0.5.1)
BugReports: https://gitlab.com/bu_cnio/beyondcell/-/issues
RoxygenNote: 7.1.1