correct getopts syntax for log file option in corresp_contigs.sh

cmdoret · Aug 4, 2018 · 574e0b7 · 574e0b7
1 parent 87aa12b
commit 574e0b7
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/src/convert_coord/corresp_contigs.sh b/src/convert_coord/corresp_contigs.sh
@@ -20,7 +20,7 @@ EOF
 }
 
 # Parsing CL arguments
-while getopts ":O:N:lc:h" opt; do
+while getopts ":O:N:g:lc:h" opt; do
  case $opt in
  O ) OLD_REF=${OPTARG} ;;
  N ) NEW_REF=${OPTARG} ;;