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CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

Python 271 50 Updated Jun 24, 2024

tools for processing gene expression omnibus data

Python 1 1 Updated May 17, 2020

Python library to handle Gene Ontology (GO) terms

Python 738 211 Updated Jun 18, 2024

A python script and package for gene enrichment analysis, read the docs @

Python 6 2 Updated Sep 17, 2019

Single-cell analysis in Python. Scales to >1M cells.

Python 1,801 582 Updated Jun 28, 2024

R toolkit for single cell genomics

R 2,174 891 Updated Jun 24, 2024