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Type: All
Language: Python
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scverse / scanpy

Single-cell analysis in Python. Scales to >1M cells.

Python 1,845 593 Updated Aug 15, 2024

tanghaibao / goatools

Python library to handle Gene Ontology (GO) terms

Python 755 211 Updated Jun 29, 2024

broadinstitute / CellBender

CellBender is a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.

Python 278 50 Updated Jul 17, 2024

pmoris / goscripts

A python script and package for gene enrichment analysis, read the docs @

Python 6 2 Updated Sep 17, 2019

alicenguyen / geo-utils

tools for processing gene expression omnibus data

Python 1 1 Updated May 17, 2020