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classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF
Scripts to build a trimmed-down Windows 11 image.
A modular graph-based Retrieval-Augmented Generation (RAG) system
Fully private LLM chatbot that runs entirely with a browser with no server needed. Supports Mistral and LLama 3.
High-performance In-browser LLM Inference Engine
xHLA: Fast and accurate HLA typing from short read sequence data
Fast and accurate in silico inference of HLA genotypes from RNA-seq
This is the official development repository for BCFtools. See installation instructions and other documentation here http:https://samtools.github.io/bcftools/howtos/install.html
Pysam is a Python package for reading, manipulating, and writing genomics data such as SAM/BAM/CRAM and VCF/BCF files. It's a lightweight wrapper of the HTSlib API, the same one that powers samtool…
Empowering everyone to build reliable and efficient software.
Efficient construction of the BWT using string compression.
📦 🐳 Dockerfiles and documentation on tools for public health bioinformatics
A command line tool and library for transferring data with URL syntax, supporting DICT, FILE, FTP, FTPS, GOPHER, GOPHERS, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, MQTT, POP3, POP3S, RTMP, RTMPS, RTSP…
Identification of differential RNA modifications from nanopore direct RNA sequencing
A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.
Github for files currently published in the IPD-IMGT/HLA FTP Directory hosted at the European Bioinformatics Institute
A versatile pairwise aligner for genomic and spliced nucleotide sequences