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  • cboix.github.io Public

    personal website

    HTML Updated Jul 24, 2024

  • epimap_vis Public

    Code for EpiMap data browser

    R 14 4 Updated Jun 4, 2024

  • admultiregion_analysis Public

    Code repository for single-cell atlas of Alzheimer's disease progression across brain regions

    R 25 3 Updated Apr 23, 2024

  • EPIMAP_ANALYSIS Public

    Epimap processing and analysis code repository

    Jupyter Notebook 33 14 Updated Aug 22, 2022

  • scanpy Public

    Forked from scverse/scanpy

    Single-Cell Analysis in Python. Scales to >1M cells.

    Python BSD 3-Clause "New" or "Revised" License Updated Apr 16, 2020

  • MACS Public

    Forked from macs3-project/MACS

    MACS -- Model-based Analysis of ChIP-Seq

    Python Other Updated Jan 6, 2019

  • Motif_Validation Public

    Motif Validation Pipeline for ENCODE

    Shell Updated Jun 28, 2018

  • TF-mimic Public

    Code and analysis for QCB 301 RNA-seq mimic project

    R Updated Nov 27, 2014

  • rdaneel Public

    COS 424: Reddit Scraping and Internet Memory Project

    Python Updated May 12, 2014

  • hotspot Public

    Forked from rthurman/hotspot

    Hotspot is a program for identifying genomic regions of local enrichment of short-read sequence tags.

    Shell GNU General Public License v2.0 Updated Apr 12, 2014

  • INSevo Public

    Fly and Human Insulin pathway evolution: Jun-Aug 2013

    R Updated Aug 9, 2013