Nanopore data assembler

GUI/CommandLine Tool Box for biologistists to utilize NGS data.

Long read based human genomic structural variation detection with cuteSV

SQANTI2 is now replaced by SQANTI3. Please go to: https://github.com/ConesaLab/SQANTI3

Fast and accurate de novo assembler for long reads

A markdown version emoji cheat sheet

an easy to use implementation of the NCBI taxonomy database for daily use

Ultrafast de novo assembly for long noisy reads (though having no consensus step)

A C# port of shadowsocks

Tensors and Dynamic neural networks in Python with strong GPU acceleration

A memory-efficient implementation of DenseNets

Analysis of single cell RNA-seq data course

code for Holistically-Nested Edge Detection

An Open Source Machine Learning Framework for Everyone

AiLearning：数据分析+机器学习实战+线性代数+PyTorch+NLTK+TF2

An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)

Scrapy, a fast high-level web crawling & scraping framework for Python.

ATLAS - Three commands to start analyzing your metagenome data

Official code repository for GATK versions 4 and up

KOBAS: a command line tool for identifying significant pathways from genomic data

Transcript assembly and quantification for RNA-Seq

classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF

A blog template, powered by Jekyll

A content-first, sliding sidebar theme for Jekyll.

Genome-scale protein function classification

De-Novo Repeat Discovery Tool

🎮 happy canvas

Scallop is a reference-based transcriptome assembler for RNA-seq

Next generation sequencing reads de novo assembler.