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A tool for creating bundle definitions for the QIT diffusion MRI pipeline

Shell 1 Updated Jul 6, 2023

Sync your markdown files with Confluence pages.

Go 996 148 Updated Sep 9, 2024

A repository for the Quantitative Imaging Toolkit (QIT)

Java 20 2 Updated Oct 29, 2023
C++ 1 Updated Jun 4, 2018

A repository of tools for mapping the auditory pathway with diffusion MRI

Makefile 1 Updated Nov 8, 2021

Everything that makes working with databases easier

4,050 332 Updated Sep 9, 2024

Code for the paper "PixelCNN++: A PixelCNN Implementation with Discretized Logistic Mixture Likelihood and Other Modifications"

Python 1,910 437 Updated Feb 3, 2020

Perf monitoring CLI tool for Apple Silicon

Python 3,318 147 Updated Apr 18, 2024

Python interface for generating coordinate tables and region labels from statistical MRI images

Jupyter Notebook 88 32 Updated Aug 12, 2024

Contrast-agnostic segmentation of MRI scans

Python 354 92 Updated Jul 17, 2024

Multi-site dMRI harmonization

Python 44 14 Updated Jan 22, 2024

BrkRaw: A comprehensive tool to access raw Bruker Biospin MRI data

Python 42 28 Updated Jun 25, 2024
Python 9 2 Updated Dec 3, 2021

Submission for the VALDO challenge Task2 - microbleed segmentation

Python 3 Updated Aug 5, 2021

A framework for developing neural network models for 3D image processing.

Python 158 46 Updated Aug 11, 2024

BrukerEyes is a cross-platform open-source package for Bruker Datasets management

Java 2 Updated Mar 14, 2023

Collaborative vectorial annotation tool for ultra high resolution data.

JavaScript 42 41 Updated Oct 8, 2023

🚀 Awesome list of open source applications for macOS. https://t.me/s/opensourcemacosapps

41,030 2,292 Updated Aug 15, 2024

Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute

Jupyter Notebook 72 40 Updated Jul 16, 2024

An efficient PyTorch library for deep generative modeling.

Python 906 75 Updated May 29, 2024

Roots is a package designed to take experimentally determined morphometric data and return an artificial neuronal arbor which satisfies the user-defined parameters.

Python 5 3 Updated May 30, 2021

This script is used to support the addition of biologically realistic jitter to curves based on histological data. The basic principle of this method is to utilized hypothetical growth cones to con…

Python 2 Updated May 30, 2021

swc to vtk converter for visualization of neuron and neural circuit simulation in ParaView

Python 12 4 Updated Jan 26, 2018

online histology annotation webapp

JavaScript 6 1 Updated May 22, 2024

Node Version Manager - POSIX-compliant bash script to manage multiple active node.js versions

Shell 78,717 7,889 Updated Sep 8, 2024

A collection of awesome devtools from around the internet

TypeScript 21 5 Updated Sep 22, 2023

A list of /uses pages detailing developer setups, gear, software and configs.

JavaScript 4,536 1,380 Updated Aug 30, 2024

An Engine-Agnostic Deep Learning Framework in Java

Java 4,064 648 Updated Sep 9, 2024

The library for web and native user interfaces.

JavaScript 227,206 46,320 Updated Sep 9, 2024

Set up a modern web app by running one command.

JavaScript 102,510 26,767 Updated Aug 27, 2024
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