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Similar Patient Discovery
Difficulty: Hard
GSoC-2024
GSoC 2024 Candidate Projects
Python
Size: Large (350h)
#116
opened Mar 26, 2024 by
inodb
Integrate AlphaMissense into Genome Nexus and cBioPortal
cBioPortal
Difficulty: Medium
Genome-Nexus
GSoC-2024
GSoC 2024 Candidate Projects
Java
Javascript
Size: Large (350h)
#115
opened Mar 22, 2024 by
leexgh
AI/LLM Generated gene alteration and expression based subtyping for each tumor type
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
Prompt Engineering
Python
Size: Large (350h)
Size: Medium (175h)
#114
opened Mar 20, 2024 by
inodb
Frontend visualization and incorporation of single cell data in cBioPortal
cBioPortal
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
Javascript
Size: Large (350h)
#112
opened Mar 15, 2024 by
sowmiyaa-kumar
Create an automated metadata harmonization/curation tool
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
Python
Size: Large (350h)
#111
opened Feb 27, 2024 by
shbrief
Create pipeline/interface to prioritize variants for OncoKB curation
Difficulty: Hard
GSoC-2024
GSoC 2024 Candidate Projects
Javascript
oncokb
Python
Size: Large (350h)
#110
opened Feb 6, 2024 by
zhx828
PathwayMapper improvements
cBioPortal
Difficulty: Hard
GSoC-2024
GSoC 2024 Candidate Projects
Java
Javascript
Size: Large (350h)
#109
opened Feb 6, 2024 by
ugurdogrusoz
Upgrade cBioPortal to newer version of Node.js and Webdriver.io
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
Size: Medium (175h)
#108
opened Feb 5, 2024 by
alisman
Add ability to spawn code notebooks from cBioPortal queries
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
Size: Large (350h)
Size: Medium (175h)
#107
opened Feb 2, 2024 by
alisman
Clinical Timeline Standalone Package and Documentation
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
Size: Large (350h)
Size: Medium (175h)
#106
opened Jan 9, 2024 by
cannin
Create Chat Bot Interface Trained On Documentation Site
cBioPortal
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
Size: Large (350h)
Size: Medium (175h)
#102
opened Apr 1, 2023 by
inodb
Human Tumor Atlas Network - Data Schemas
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
HTAN
Human Tumor Atlas Network (https://humantumoratlas.org/)
Javascript
Size: Large (350h)
Size: Medium (175h)
#101
opened Apr 1, 2023 by
inodb
Add gene-level charts to study view for categorical molecular profiles
Difficulty: Hard
GSoC-2024
GSoC 2024 Candidate Projects
Java
Javascript
Size: Large (350h)
Size: Medium (175h)
#100
opened Mar 3, 2023 by
tmazor
Pathway improvements in cBioPortal
Difficulty: Hard
GSoC-2023
GSoC 2023 Candidate Projects
Java
Javascript
Size: Large (350h)
#98
opened Feb 8, 2023 by
ugurdogrusoz
Visualize OncoKB annotation and generate sample/patient report
Difficulty: Medium
GSoC-2024
GSoC 2024 Candidate Projects
Javascript
oncokb
Size: Large (350h)
#95
opened Feb 7, 2023 by
zhx828
Improve Genome Nexus' Command Line Interface Experience
Difficulty: Medium
Genome-Nexus
GSoC-2022
GSoC 2022 Candidate Projects
Java
Javascript
Python
Size: Large (350h)
#93
opened Apr 1, 2022 by
inodb
Improve Genome Nexus' Mobile and Search Experience
CSS
Difficulty: Medium
Genome-Nexus
GSoC-2022
GSoC 2022 Candidate Projects
Java
Javascript
Size: Large (350h)
Size: Medium (175h)
#92
opened Apr 1, 2022 by
inodb
Study Comparison Support
Difficulty: Medium
GSoC-2022
GSoC 2022 Candidate Projects
Java
Javascript
Size: Medium (175h)
SQL
#91
opened Feb 22, 2022 by
Luke-Sikina
Extend chart types in study view
Difficulty: Hard
GSoC-2024
GSoC 2024 Candidate Projects
Javascript
Size: Large (350h)
#90
opened Jan 26, 2021 by
inodb
Add Mutation Diagram on Study View for Enhanced Mutation Analysis
Difficulty: Medium
GSoC-2023
GSoC 2023 Candidate Projects
Javascript
Size: Medium (175h)
#87
opened Jan 25, 2021 by
inodb
Interactive web tour
Difficulty: Medium
GSoC-2023
GSoC 2023 Candidate Projects
Javascript
Size: Medium (175h)
#86
opened Jan 25, 2021 by
inodb
[r-client] cBioPortalData: Example Bioconductor Workflow
cBioPortal
Difficulty: Medium
GSoC-2022
GSoC 2022 Candidate Projects
R
Size: Medium (175h)
#83
opened Feb 4, 2020 by
LiNk-NY
Patient Similarity
cBioPortal
Difficulty: Hard
GSoC-2023
GSoC 2023 Candidate Projects
Java
Javascript
Size: Large (350h)
#50
opened Jan 21, 2019 by
inodb
cBioPortal Data Collection Automation
cBioPortal
devops
Difficulty: Medium
GSoC-2023
GSoC 2023 Candidate Projects
Size: Medium (175h)
#84
opened Jan 25, 2018 by
inodb
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