iBioSim is a computer-aided design (CAD) tool aimed for the modeling, analysis, and design of genetic circuits. It is capable of importing and exporting models specified using the Systems Biology M…

ShortBOL - A abstract language implementing the SBOL Data Model.

Jupyter notebooks and python scripts for investigating the 2019 coronavirus outbreak

Voila Covid-19 Dashboard

Webscraping and data analysis of DNA with pandas and Selenium

TISIGNER: Unleash the power of synthetic biology

A web application to validate SBOL files

❄️ Python API for the JBEI-ICE sample manager

Real time control of a genetic toggle switch

🔮 Predict DNA assembly clone validity rates - powered by Kappa

🐾 DNA overhang misannealing data for Python

Library for combinatorially specifying, constraining, and exploring genetic design spaces.

Toolkit for Modelling and Simulation of Gene Expressions and Metabolism

📚 Shared slideshows, courses, etc. from the EGF

✂️ Design compact restriction sites arrays (python utility)

🔗 Short overhangs design for DNA assembly

👓 Python library to parse Snapgene *.dna files to dict or biopython seqrecord.

A web tool that removes restriction sites from given DNA sequences.

💫 Computer-aided DNA assembly validation and identification from restriction digests.

🏖️ The EGF Collection of Useful Bio Apps - Web demos of EGF software

➰ Draw genetic elements with HTML & CSS

💠 Find common blocks and differences between DNA sequences

👉 EGF Design and Build, the Foundry's DNA design ordering portal

Amyris F# Computational Biology Library

A route planner for DNA assembly

🎺 Plot DNA digestion band patterns with Python

🌠 Easily download genomes and build BLAST/Bowtie indexes in Python

🎨 Python library to plot multi-part genetic constructs

Batch domestication of genetic parts with Python