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[Tools] miRanda: An miRNA target scanner that aims to predict mRNA targets for microRNAs using dynamic-programming alignment and thermodynamics

C 1 1 Updated Dec 30, 2022

Python library to handle Gene Ontology (GO) terms

Python 755 211 Updated Jun 29, 2024

Align short RNA seqeuncing reads to determine the length of of overhang

Python 4 Updated Feb 28, 2023

Official git repository for Biopython (originally converted from CVS)

Python 4,276 1,729 Updated Aug 17, 2024

Full-Length Alternative Isoform analysis of RNA

Python 203 70 Updated Jul 3, 2024

Pipeline to carry out tasks common in the Hunt Lab on small RNA data

Python 4 Updated Dec 13, 2023

Error correction of ONT transcript reads

Python 57 9 Updated Sep 6, 2023

RNA-seq aligner

C 1,808 501 Updated Jun 28, 2024

A tool to visualize various sRNA characteristics

Python 3 2 Updated Aug 20, 2018

Code for manuscripts published by Thompson and colleagues

HTML 4 3 Updated Oct 2, 2019

Pipeline for analysing intergenic regions in bacteria

Perl 36 7 Updated Oct 25, 2019