Stars
🌙 LunarVim is an IDE layer for Neovim. Completely free and community driven.
🎨 Type-safe and powerful Python library to generate SVG files
FieldPrism curates field images by correcting image distortion, converting pixel distance to metric, and renaming files based on QR codes.
The entrance repository of Markdown presentation ecosystem
Phylogenetics and bioinformatics in the Julia language
A place to store various configs I use and share often
Helper scripts for processing and visualization of phylogenetics datasets
Gonum is a set of numeric libraries for the Go programming language. It contains libraries for matrices, statistics, optimization, and more
Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.
PASTA (Practical Alignment using SATe and Transitivity)
Python scripts (and a few non-python) that have come in handy for various phylogenetics-related tasks
A program for multimodel inference on speciation and trait evolution
Allow users to visually lay out Arbor workflows.
A bundle of Tangelo applications used by NSF Arbor (Phylogenetic Comparative Methods system)
Application prototype to upload datasets into Arbor, create new projects, and organize source data.
ARBOR Revolutionary Workflows for the Tree of Life.
phylogenetics tools for linux (and other mostly posix compliant) computers
simulator of collections of trees that are based on a classification with stochastic errors introduced
A versatile and scalable algorithm for rogue taxon identification. Also includes implementations of the maximum agreement subtree, leaf stability index and taxonomic instability index