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DTU Biosustain

The Novo Nordisk Foundation Center for Biosustainability

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  1. potion potion Public

    Flask-Potion is a RESTful API framework for Flask and SQLAlchemy, Peewee or MongoEngine

    Python 488 51

  2. cameo cameo Public

    cameo - computer aided metabolic engineering & optimization

    Python 113 44

  3. shu shu Public

    Multi-dimensional, trans-omics metabolic maps.

    Rust 44 1

  4. croissance croissance Public

    Tool for estimating growth rates from microbial growth curves

    Python 27 13

  5. Maud Maud Public

    Enzyme models that take into account kinetics, allostery and thermodynamics

    Python 26 2

  6. snakemake_UmetaFlow snakemake_UmetaFlow Public

    Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake

    Python 24 7

Repositories

Showing 10 of 122 repositories
  • pankb_data_prep Public
    biosustain/pankb_data_prep’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 7, 2024
  • pankb Public

    The Pangenome Knowledge Base (PanKB) serves as an up-to-date resource for pangenomics research methods and the dissemination of results and currently offers basic pangenome characteristics and advanced pangenome analytics for 8 major biotech bacteria families.

    biosustain/pankb’s past year of commit activity
    HTML 1 MIT 0 0 0 Updated Nov 6, 2024
  • pankb_db Public
    biosustain/pankb_db’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 6, 2024
  • pyOpenMS_UmetaFlow Public

    Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)

    biosustain/pyOpenMS_UmetaFlow’s past year of commit activity
    Jupyter Notebook 18 Apache-2.0 7 5 1 Updated Nov 6, 2024
  • dsp_workshop_bash Public

    Resources to be used in conjunction with the Bash workshop from the Data Science Platform

    biosustain/dsp_workshop_bash’s past year of commit activity
    Shell 1 0 0 0 Updated Nov 5, 2024
  • dsp_nextflow_training Public

    Hands-on Nextflow training materials and information

    biosustain/dsp_nextflow_training’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Nov 4, 2024
  • dsp_pandas Public

    Organize pandas based functionality across projects.

    biosustain/dsp_pandas’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Nov 1, 2024
  • dsp_notes Public

    Public notes and hints of the Data Science Platform.

    biosustain/dsp_notes’s past year of commit activity
    Jupyter Notebook 1 1 0 1 Updated Oct 31, 2024
  • dsp_nfcore_rnaseq Public

    Guide to run nf-core RNA sequencing analysis pipeline in our Azure cloud infrastructure

    biosustain/dsp_nfcore_rnaseq’s past year of commit activity
    0 0 0 0 Updated Oct 30, 2024
  • git-tutorial Public Forked from RasmussenLab/git-tutorial

    VS Code on Binder

    biosustain/git-tutorial’s past year of commit activity
    Python 2 BSD-3-Clause 64 0 0 Updated Oct 28, 2024
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