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41 Open 72 Closed
41 Open 72 Closed
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Issues list

About SCFAs.
#170 opened Dec 29, 2023 by orange-3711
1
X axis of the CV error plots or tensorboard plots
#159 opened Mar 9, 2022 by manjumoorthy95
4
Can songbird be used in a Jupyter notebook without command line wrappers? question Further information is requested
#155 opened Jul 9, 2021 by jolespin
11
README installation instructions don't seem to work
#154 opened Jun 22, 2021 by wasade
3
missing column in songbird output
#153 opened Mar 24, 2021 by bck243
songbird 2?
#148 opened Jan 15, 2021 by Alxdu
3
ValueError: initial_value must have a shape specified: Tensor("random_normal:0", shape=(2, ?), dtype=float32)
#146 opened Dec 14, 2020 by BrettLoman
1
About filtering the input biom file
#145 opened Nov 25, 2020 by coralzhang
5
Memory errors for large datasets
#141 opened Oct 21, 2020 by mortonjt
4
Using songbird standalone
#134 opened Aug 5, 2020 by coralzhang
5
Error running songbird standalone
#133 opened Jul 13, 2020 by swokybio
7
confusing ID column names
#129 opened May 6, 2020 by redbluewater
1
TypeError: SparseDataFrame() takes no arguments dependencies tensorflow tensorflow tensorflow tensorflow tensorflow
#128 opened Apr 8, 2020 by sformel
6
More QIIME 2 / TensorFlow conda-forge installation problems ._. dependencies tensorflow tensorflow tensorflow tensorflow tensorflow
#126 opened Mar 31, 2020 by fedarko
@fedarko
6
Interpretation of differentials question Further information is requested
#119 opened Feb 26, 2020 by dadahan
7
Pandas versions should be pinned to be below v1 dependencies tensorflow tensorflow tensorflow tensorflow tensorflow
#117 opened Feb 21, 2020 by fedarko
3
Getting Q-squared values for standalone Songbird? enhancement New feature or request ui Improving the user interface
#113 opened Feb 7, 2020 by fedarko
3
Examples and/or more precise information on "good enough" data re: model fitting docs Improving the documentation
#112 opened Feb 6, 2020 by fedarko
2
More exact tests code internals Problems with the non-user-facing parts of the codebase -- e.g. style, tests
#111 opened Feb 4, 2020 by fedarko
Upgrading to TensorFlow v2 or PyTorch code internals Problems with the non-user-facing parts of the codebase -- e.g. style, tests dependencies tensorflow tensorflow tensorflow tensorflow tensorflow future ideas Going to take a substantial amount of effort to implement, but potentially doable in the future
#110 opened Feb 4, 2020 by fedarko
2
Make error message on invalid training column values more clear ui Improving the user interface
#102 opened Jan 8, 2020 by fedarko
1
Accounting for phylogenetic relation between samples in the formula? enhancement New feature or request future ideas Going to take a substantial amount of effort to implement, but potentially doable in the future ui Improving the user interface wontfix This will not be worked on
#97 opened Nov 12, 2019 by Jigyasa3
1
Adding --p-logging-dir option enhancement New feature or request
#91 opened Oct 21, 2019 by mortonjt
1
add examples of how model fitting plots *should not* look? docs Improving the documentation
#84 opened Oct 4, 2019 by fedarko
2
Add explanations for what exactly "Intercept" differentials mean docs Improving the documentation
#83 opened Oct 3, 2019 by fedarko
4
ProTip! no:milestone will show everything without a milestone.