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  1. MOFA2 MOFA2 Public

    Multi-Omics Factor Analysis

    R 286 50

  2. MOFA MOFA Public

    Multi-Omics Factor Analysis

    R 229 56

  3. mofapy2 mofapy2 Public

    Multi-omics factor analysis v2

    Python 33 26

  4. slalom slalom Public

    Jupyter Notebook 28 10

  5. mofax mofax Public

    Work with trained factor models in Python

    Jupyter Notebook 24 10

  6. FISHFactor FISHFactor Public

    A probabilistic factor model for spatial transcriptomics data with subcellular resolution

    Jupyter Notebook 20

Repositories

Showing 10 of 13 repositories
  • MOFA2 Public

    Multi-Omics Factor Analysis

    bioFAM/MOFA2’s past year of commit activity
    R 286 LGPL-3.0 50 60 2 Updated Jun 29, 2024
  • mofapy2 Public

    Multi-omics factor analysis v2

    bioFAM/mofapy2’s past year of commit activity
    Python 33 LGPL-3.0 26 7 2 Updated Apr 13, 2024
  • mofax Public

    Work with trained factor models in Python

    bioFAM/mofax’s past year of commit activity
    Jupyter Notebook 24 MIT 10 8 5 Updated Jan 23, 2024
  • cellij Public

    Implementation of a Modular Multi-Omics Factor Model Framework

    bioFAM/cellij’s past year of commit activity
    Python 3 BSD-3-Clause 0 13 3 Updated Oct 19, 2023
  • cellij-notebooks Public
    bioFAM/cellij-notebooks’s past year of commit activity
    Jupyter Notebook 2 BSD-3-Clause 0 0 0 Updated Sep 15, 2023
  • MOFAdata Public

    Data for Multi-Omics Factor Analysis (MOFA)

    bioFAM/MOFAdata’s past year of commit activity
    R 2 2 1 0 Updated Jun 9, 2023
  • FISHFactor Public

    A probabilistic factor model for spatial transcriptomics data with subcellular resolution

    bioFAM/FISHFactor’s past year of commit activity
    Jupyter Notebook 20 LGPL-3.0 0 0 0 Updated May 3, 2023
  • MOFA2_tutorials Public

    MOFA2 Tutorials

    bioFAM/MOFA2_tutorials’s past year of commit activity
    HTML 4 9 1 1 Updated Feb 8, 2023
  • slalom Public
    bioFAM/slalom’s past year of commit activity
    Jupyter Notebook 28 Apache-2.0 10 6 1 Updated Feb 1, 2023
  • MEFISTO_analyses Public

    Repository containing the code to reproduce the analyses contained in the MEFISTO manuscript

    bioFAM/MEFISTO_analyses’s past year of commit activity
    R 7 2 0 0 Updated Jul 27, 2021
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