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@bhklab

BHKLAB

The Haibe-Kains Laboratory @ Princess Margaret Cancer Centre
README.md

Mission

Our overarching goal consists of developing cutting-edge computational tools and predictive models to identify new cancer vulnerabilities and improve the way precision oncology is delivered to patients.

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  1. PharmacoGx PharmacoGx Public

    R package to analyze large-scale pharmacogenomic datasets.

    R 63 26

  2. med-imagetools med-imagetools Public

    Transparent and reproducible medical image processing pipelines in Python.

    Python 31 7

  3. CoreGx CoreGx Public

    Shared code for both PharmacoGx and RadioGx

    R 2 3

  4. AnnotationGx AnnotationGx Public

    An R package to query various bio/chem-informatics databases APIs to construct annotation files.

    R 1 1

Repositories

Showing 10 of 172 repositories
  • PredictIO_Nextflow Public
    bhklab/PredictIO_Nextflow’s past year of commit activity
    Nextflow 0 0 0 0 Updated Jul 18, 2024
  • orcestra-new-api Public
    bhklab/orcestra-new-api’s past year of commit activity
    Python 0 0 0 0 Updated Jul 17, 2024
  • PMATCH-web Public
    bhklab/PMATCH-web’s past year of commit activity
    JavaScript 0 0 0 0 Updated Jul 17, 2024
  • PymRMRe Public
    bhklab/PymRMRe’s past year of commit activity
    C++ 10 MIT 3 8 2 Updated Jul 16, 2024
  • ORCESTRA Public

    ORCESTRA is a new web application that enables users to search, request and manage pharmacogenomic datasets (PSets).

    bhklab/ORCESTRA’s past year of commit activity
    JavaScript 4 Apache-2.0 1 15 1 Updated Jul 15, 2024
  • PredictioR Public
    bhklab/PredictioR’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jul 15, 2024
  • ORCESTRA-api Public
    bhklab/ORCESTRA-api’s past year of commit activity
    Python 2 0 10 0 Updated Jul 3, 2024
  • GraphComm Public
    bhklab/GraphComm’s past year of commit activity
    Jupyter Notebook 2 2 0 0 Updated Jul 2, 2024
  • SignatureSets Public

    Compendium of published molecular signatures

    bhklab/SignatureSets’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jun 26, 2024
  • SCARF Public
    bhklab/SCARF’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 0 0 0 Updated Jun 21, 2024
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