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Fast sequencing data quality metrics

C 10 Updated Aug 13, 2024

A wrapper around the python-irodsclient to allow for easy interaction with iRODS servers.

Python 11 6 Updated Aug 22, 2024

Minimum Information about any (X) Sequence” (MIxS) specification

Python 36 20 Updated Aug 20, 2024

iRODS Command-line Tools written in Go

Go 29 17 Updated Aug 22, 2024

https://www.researchobject.org/runcrate/

Common Workflow Language 4 6 Updated Apr 11, 2024

MGnify oriented implementation for the Marine Genomic Observatories oriented pipeline, developed in the framework of an EOSC-Life funded project

Python 7 7 Updated May 13, 2024

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

Python 423 49 Updated Jul 18, 2024

MGnify genome analysis pipeline

Python 97 21 Updated Aug 16, 2024

Data intensive science for everyone.

Python 1,363 989 Updated Aug 21, 2024

SemiBin: metagenomics binning with self-supervised deep learning

Python 110 10 Updated Aug 3, 2024

Parsing unstructured text data

C++ 1 Updated Jan 19, 2023

Common Workflow Language reference implementation

Python 330 230 Updated Aug 20, 2024

A different take on codon optimization

Python 4 1 Updated Aug 27, 2020