[releng] Docker support

releng/com.b2international.snowowl.server.update/assembly/common/bin/dmk.sh

@@ -183,6 +183,9 @@ then
  -XX:+AlwaysPreTouch \
  -Xss1m \
  -Xloggc:$KERNEL_HOME/serviceability/`date +%F_%H%M-%S`-gc.log \
+ -XX:+UseConcMarkSweepGC \
+ -XX:CMSInitiatingOccupancyFraction=75 \
+ -XX:+UseCMSInitiatingOccupancyOnly \
  -XX:+PrintGCDetails \
  -XX:+PrintGCDateStamps \
  -XX:+PrintGCApplicationStoppedTime \

releng/docker/examples/snow-owl-cluster-example/docker-compose.yml

@@ -0,0 +1,41 @@
+version: '3.7'
+services:
+ elasticsearch:
+ image: docker.elastic.co/elasticsearch/elasticsearch:6.5.0
+ container_name: elasticsearch
+ environment:
+ ES_JAVA_OPTS: "-Xms6g -Xmx6g"
+ volumes:
+ - esdata:/usr/share/elasticsearch/data
+ networks:
+ elastic:
+ aliases:
+ - es
+ healthcheck:
+ test: ["CMD", "curl", "-f", "http:https://es:9200"]
+ interval: 1s
+ timeout: 1s
+ retries: 60
+ ports:
+ - 9200:9200
+ - 9300:9300
+
+
+ snowowl:
+ image: b2ihealthcare/snow-owl:7.0.0
+ container_name: snowowl
+ environment:
+ SO_JAVA_OPTS: "-Xms2g -Xmx2g"
+ ES_CLUSTER_URL: "http:https://es:9200"
+ depends_on:
+ - elasticsearch
+ networks:
+ - elastic
+ ports:
+ - 8080:8080
+
+networks:
+ elastic:
+
+volumes:
+ esdata:

releng/docker/examples/snow-owl-embedded-example/docker-compose.yml

@@ -0,0 +1,14 @@
+version: '3.7'
+services: 
+ snowowl:
+ image: b2ihealthcare/snow-owl:7.0.0
+ environment:
+ SO_JAVA_OPTS: "-Xms2g -Xmx2g"
+ container_name: snowowl
+ networks:
+ - snowowl
+ ports:
+ - 8080:8080
+
+networks:
+ snowowl:

releng/docker/pom.xml

@@ -0,0 +1,45 @@
+<project xmlns="http:https://maven.apache.org/POM/4.0.0"
+ xmlns:xsi="http:https://www.w3.org/2001/XMLSchema-instance"
+ xsi:schemaLocation="http:https://maven.apache.org/POM/4.0.0 http:https://maven.apache.org/xsd/maven-4.0.0.xsd">
+ <modelVersion>4.0.0</modelVersion>
+
+ <artifactId>docker</artifactId>
+ <packaging>pom</packaging>
+
+ <parent>
+ <groupId>com.b2international.snowowl</groupId>
+ <artifactId>releng-parent</artifactId>
+ <version>7.1.0-SNAPSHOT</version>
+ </parent>
+
+ <properties>
+ <dockerfile.maven.version>1.4.10</dockerfile.maven.version>
+ </properties>
+
+ <build>
+ <plugins>
+ <plugin>
+ <groupId>com.spotify</groupId>
+ <artifactId>dockerfile-maven-plugin</artifactId>
+ <version>${dockerfile.maven.version}</version>
+ <executions>
+ <execution>
+ <id>default</id>
+ <goals>
+ <goal>build</goal>
+<!-- <goal>push</goal> -->
+ </goals>
+ </execution>
+ </executions>
+ <configuration>
+ <repository>b2ihealthcare/snow-owl</repository>
+ <tag>${project.version}</tag>
+ <buildArgs>
+ <SNOWOWL_VERSION>7.0.0</SNOWOWL_VERSION>
+ </buildArgs>
+ </configuration>
+ </plugin>
+ </plugins>
+ </build>
+
+</project>

releng/docker/src/Dockerfile

@@ -0,0 +1,41 @@
+FROM centos:7
+LABEL maintainer="B2i Healthcare <http:https://b2i.sg/>"
+
+ARG SNOWOWL_VERSION
+
+# Install java 1.8 as a pre requirement
+RUN yum -y update -q -e 0 && yum clean all
+RUN yum install -y \
+ java-1.8.0-openjdk \
+ java-1.8.0-openjdk-devel -q -e 0
+
+# Set JAVA_HOME environment variable
+ENV JAVA_HOME /etc/alternatives/jre
+
+# Install wget
+RUN yum -y install wget -q -e 0 
+# Download 7.0.0 Snow Owl rpm package
+RUN wget https://github.com/b2ihealthcare/snow-owl/releases/download/v${SNOWOWL_VERSION}/snow-owl-oss-${SNOWOWL_VERSION}.rpm -q
+
+# Install Snow Owl rpm package
+RUN rpm --install snow-owl-oss-${SNOWOWL_VERSION}.rpm
+
+RUN rm -f snow-owl-oss-${SNOWOWL_VERSION}.rpm
+
+# Openshift overrides USER and uses ones with randomly uid>1024 and gid=0
+RUN chgrp 0 /usr/share/snowowl/bin/startup.sh && \
+ chmod g=u /etc/passwd && \
+ chmod 0775 /usr/share/snowowl/bin/startup.sh
+
+# Overwrite config file after installation
+COPY /config/snowowl.yml /etc/snowowl/snowowl.yml
+
+# Set environment variable for Snow Owl data folder
+ENV SO_PATH_DATA /var/lib/snowowl:$SO_PATH_DATA
+
+# Expose necessary ports used by Snow OWl
+EXPOSE 2036 8080
+
+USER snowowl
+
+ENTRYPOINT ["/usr/share/snowowl/bin/startup.sh"]

releng/docker/src/config/snowowl.yml

@@ -0,0 +1,41 @@
+#
+# Copyright 2011-2019 B2i Healthcare Pte Ltd, http:https://b2i.sg
+#
+
+# necessary to connect one user to the system otherwise Snow Owl startup fails
+systemUser: true
+
+identity:
+ providers:
+ - file:
+ name: users
+# - ldap:
+# uri: <ldap_uri>
+# baseDn: dc=snowowl,dc=b2international,dc=com
+# rootDn: cn=admin,dc=snowowl,dc=b2international,dc=com
+# rootDnPassword: <adminpwd>
+# userIdProperty: uid
+# usePool: false
+
+# snomed:
+# concreteDomainSupport: false
+# maxReasonerCount: 1
+# ids:
+# strategy : EMBEDDED
+
+repository:
+ host: 0.0.0.0
+ port: 2036
+
+ index:
+ socketTimeout: 60000
+ clusterUrl: ${ES_CLUSTER_URL}
+
+# monitoring:
+# enabled: true
+
+ #reviewManager:
+ # Minutes to keep reviews in CURRENT state persisted in the index (default 15 minutes)
+ # keepCurrentMins: 15
+ # Minutes to keep reviews in others states persisted (default 5 minutes)
+ # keepOtherMins: 5