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Multiscale Imaging for marMOset Software & Analysis

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the mimosa project

a set of tools for Multiscale Imaging for marMOset Software & Analysis

Installing for development

git clone https://github.com/arnaudletroter/mimosa.git
cd mimosa

Create the conda environment by running

for macosX( tested on macos Ventura 13.4.1):

conda env create -f install_env/Mac/environment_macosX_13.4.yml
conda activate mimosa_dev
pip install install_env/Mac/additionnal_package/pylibCZIrw-3.5.1-cp311-cp311-macosx_10_9_universal2.whl

for Linux ( tested on Debian 12 bookworm):

conda env create -f install_env/Linux/requirements_Debian12.yml
conda activate mimosa_dev

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