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Neuromatch group project: Relevance of sensory modalities for spatial navigation in foraging behaviours of the bee

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Relevance of sensory modalities for spatial navigation

Reinforcement Learning Model Training and Prediction for Neuromatch group project This repository contains Python scripts and utilities for training a custom Reinforcement Learning (RL) model using the Twin Delayed Deep Deterministic Policy Gradient (TD3) algorithm. The trained model can be used for predicting actions in a custom Gym environment.

The problem is goal-oriented spatial navigation with multi-modal sensory inputs. Two sensory inputs, that can be knocked-out (added noise) in order to investigate the importance of the senses: How do different modalities contribute to goal-oriented spatial navigation?

Agent in complex environment:

complex.mp4

Model specifics:

Environment Design:

  • 2D env (Gymnasium) with continuous action space
  • action space:
    • acceleration
    • angular acceleration
  • rewards:
    • 1000 points for finding the goal
    • negative reward for energy expenditure
    • negative reward for distance from the goal

Observation space (6 inputs):

  • sensory inputs:
    • vision - one hot encoding (0/1) modeled with limited angle cone, (wall vision included - based on ray casting)
    • smell - modeled as euclidean distance from the goal
  • time elapsed
  • velocity, angular velocity
  • at each time step agent receives (5, 6) matrix containing a current time frame and a memory of previous 4 frames

Training specific:

  1. multiple-round training integration with model management and custom logging
  2. early stopping if no training progress
  3. goal size can be changed, custom walls/obstacles

For our sample training we gradually decreased the size of the goal and added the walls.

Training example:

train.mp4

Files

The repository contains the following files:

  1. bee.py: Environment (gym) setup - agents action, rewards and space definition for the RL model.
  2. model.py: A Python module containing utility functions for initializing and loading the RL model.
  3. utils.py: A Python module containing utility functions for creating directories, saving the configuration, and more. 3 train_model.py: The main script to train the RL model.
  4. evaluate_model.py: evaluation script for sensory input knockout
  5. render_model.py: A script to generate and display a video of the RL model's predictions.
  6. gym_run.py: Demonstration file for testing gym changes

Folders:

  1. configs - contain all of the sample testing and training configurations
  2. notebooks - will configs used for training and analysis visualization
  3. figures

Usage

  1. Configure the config.yaml file with the desired parameters for training the RL model.

  2. Run the training script:

    python train_model.py --config_path config.yaml

    You can have a set of consecutive training rounds, make sure to specify each in a separate config.yaml and set proper alias setting. This is demonstrated in:

    bash run-multiround-training.sh

  3. Sensory knock-out experiments can be performed and saved:

    python evaluate_model.py --config_path configs/test-config.yaml

  4. After training, you can generate a video of the model's predictions using the render_model.py script or evaluate the model and save the episodes into a test log: python render_model.py --config_path configs/config.yaml

  5. Analysis of the models performance

    1. sense-knockout-analysis.ipynb - plot failure rate and episodes lengths under each sensory condition
    2. training-visualization.ipynb - plot multi-round metrics
  6. You can also use the convenience jupyter-notebooks, useful for working in google colab.

References

License

This project is licensed under the MIT License - see the LICENSE file for details.

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Neuromatch group project: Relevance of sensory modalities for spatial navigation in foraging behaviours of the bee

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