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The Division of Infectious Diseases at Cincinnati Children's
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- @amnahsiddiqa
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Starred repositories
Developmental Version of R package CliquePercolation
Parallel Mutual Information estimation for Gene Network reconstruction
Hackers' Guide to Language Models
A novel precision medicine workflow, the integrated single nucleotide polymorphism network platform (iSNP), designed to determine the mechanisms by which SNPs affect cellular regulatory networks, a…
UniCell Deconvolve - Cloud Cell Type Deconvolution For Transcriptomic Data
Get, parse, and extract information from the SRA metadata files
A tool to find sequencing data and metadata from public databases.
RNAseq analysis notes from Ming Tang
A repo for implementation of Graph features autoencoder for expression values prediction and imputation
MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations
This is a R package that intends to perform all the features possible by tensor decomposition based unsupervised feature extraction
An awesome repository of community-curated applications of ChatGPT and other LLMs im computational biology
🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
🔧 R package: startup - Friendly R Startup Configuration
A comment system powered by GitHub Discussions. 💬 💎
Docker to run RSEM for transcript quantification
Example Nextflow pipelines and programming techniques
This repo includes ChatGPT prompt curation to use ChatGPT better.
amnahsiddiqa / mzkit
Forked from xieguigang/mzkitData toolkits for processing NMR, MALDI MSI, MALDI single cell, LC-MS and GC-MS raw data, chemoinformatics data analysis and data visualization.
The Jackson Laboratory Computational Sciences Nextflow based analysis pipelines