GitHub - aleksandarkiridzic/dna-sequence-aligner: Basic seed-and-extend DNA sequence read aligner

Basic seed-and-extend DNA sequence read alignment tool.

Name		Name	Last commit message	Last commit date
Latest commit History 29 Commits
data		data
exe		exe
test		test
DNA Sequence Aligner.pdf		DNA Sequence Aligner.pdf
README.md		README.md
aligner.cpp		aligner.cpp
aligner.h		aligner.h
checkpoint.cpp		checkpoint.cpp
checkpoint.h		checkpoint.h
exceptions.h		exceptions.h
fasta.cpp		fasta.cpp
fasta.h		fasta.h
fastq.cpp		fastq.cpp
fastq.h		fastq.h
fmstr.cpp		fmstr.cpp
fmstr.h		fmstr.h
general.h		general.h
main.cpp		main.cpp
match.cpp		match.cpp
match.h		match.h
range.cpp		range.cpp
range.h		range.h
read.cpp		read.cpp
read.h		read.h
sam.cpp		sam.cpp
sam.h		sam.h
sim.cpp		sim.cpp
sim.h		sim.h
str.cpp		str.cpp
str.h		str.h
strfact.cpp		strfact.cpp
strfact.h		strfact.h
strsimilarity.cpp		strsimilarity.cpp
strsimilarity.h		strsimilarity.h
strutil.cpp		strutil.cpp
strutil.h		strutil.h
suffixarray.cpp		suffixarray.cpp
suffixarray.h		suffixarray.h

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