Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Pre-sorting using a lexicograph-based algorithm #4

Merged
merged 8 commits into from
Oct 17, 2023

Conversation

alejandrogzi
Copy link
Owner

This PR modifies the main bed2gtf fuction, adding a pre-sorting step. To achieve this, a new feature implemented for the BedRecord struct allows easy access to an outer layer for the sorting step. An error script has also been added, similar function as bed2gff.

@alejandrogzi alejandrogzi merged commit 1c974ed into master Oct 17, 2023
@alejandrogzi alejandrogzi deleted the lex_algorithm branch October 17, 2023 17:46
This pull request was closed.
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant