gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

RiboNucleic Acid (RNA) Language Model

A comprehensive guide to building RAG-based LLM applications for production.

Framework for orchestrating role-playing, autonomous AI agents. By fostering collaborative intelligence, CrewAI empowers agents to work together seamlessly, tackling complex tasks.

Read, modify and write DICOM files with python code

RoseTTAFold2 protein/nucleic acid complex prediction

Official code repository for the paper "ProteinNPT: Improving Protein Property Prediction and Design with Non-Parametric Transformers"

Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Joint collaboration between the Marks lab and the OATML group.

recipes that save time

A Unified Approach to Protein Engineering

Quill - A Modern SaaS-Platform Built With Next.js 13

Building Apps with LLMs

Segmentation models with pretrained backbones. Keras and TensorFlow Keras.

ESM-GearNet for Protein Structure Representation Learning (https://arxiv.org/abs/2303.06275)

This is the development home of the workflow management system Snakemake. For general information, see

A Python package for extracting protein sequence features

A Deep Learning Toolkit for DTI, Drug Property, PPI, DDI, Protein Function Prediction (Bioinformatics)

🧑‍🏫 60 Implementations/tutorials of deep learning papers with side-by-side notes 📝; including transformers (original, xl, switch, feedback, vit, ...), optimizers (adam, adabelief, sophia, ...), gan…

Python package to manage protein structures and their annotations