OpenICU Extractor

Requirements

before you start, convert the SAMPLE.env file to .env and fill in the required fields.

If the conceptbase is updatexd, run the following command to update the conceptbase in the pipeline:

git submodule update --remote

Name		Name	Last commit message	Last commit date
Latest commit History 282 Commits
.github		.github
conceptbase @ 345c761		conceptbase @ 345c761
icu_pipeline		icu_pipeline
test		test
.gitignore		.gitignore
.gitmodules		.gitmodules
README.md		README.md
SAMPLE.env		SAMPLE.env
create_test_db.py		create_test_db.py
mimiciv_pipeline.ipynb		mimiciv_pipeline.ipynb
mypy.ini		mypy.ini
requirements.txt		requirements.txt
ruff.toml		ruff.toml
sonar-project.properties		sonar-project.properties
test_mimiciv.sqlite		test_mimiciv.sqlite
try_yaml.py		try_yaml.py