Code to fit a Restriction Spectrum Imaging Model to Diffusion MRI Data

Courseware for the ilumr educational MRI system

Command line interface to the Automated Image Retrieval (AIR) Portal

EPI sequence creation tools for X-nucleus imaging

Code for ISBI'19 Tutorial

VQ-VAE + Transformer based synthesis of 3D anatomical imaging data

This repository enables easy and fast medical image reconstruction in Python.

Virtual Scanner Tabletop Web Application

VirtMRI: Generate images for different MRI Sequences in your Browser. Written in JavaScript and C compiled to WebASM

Repository for the Stanford Knee MRI Multi-Task Evaluation (SKM-TEA) Dataset

dcmqi (DICOM for Quantitative Imaging) is a free, open source C++ library for conversion between imaging research formats and the standard DICOM representation for image analysis results

A large scale dataset and reconstruction script of both raw prostate MRI measurements and images

MRI simulator for educational purposes written in MATLAB

Here, you can find the custom Matlab codes we have used for analysis of 2D EPSI data from our hyperpolarized 13C-MRSI studies in preclinical brain tumor models. The data were acquired on a Bruker h…

Matlab code for pharmacokinetic modeling of hyperpolarized [1-13C]-pyruvate

Motion-state weighted Motion-Compensation reconstruction algorithm

Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization

Lightweight Python package to process MP2RAGE and ME-MP2RAGE-data

Collection of vendor-neutral & open-source pulse sequences developed in RTHawk for qMRI.

A PyTorch-powered differentiable image reconstruction/optimization toolbox

This is Jupyter notebook/python code developed for a UW-Madison introductory MRI class.