NOTICE:  

The struture of the Connectathon repo has been updated to match conventions of other IGs to enable cross IG usage of the "refresh" tooling. 

The impacted the following directory changes:
WAS: 
   "cql/"
   "resources/library/"
   "resources/measure/"
   "resources/valuesets/"
   "tests/"
   
UPDATED TO:  
   "input/pagecontent/cql/"
   "input/resources/library/"
   "input/resources/measure/"
   "input/vocabulary/valueset/"
   "input/tests/"
   
These changes temporarily impacted the ability to run Connectathon measures from the Atom CQL plugin.  We will be releasing an update to address the issue by end of day 3/4/2020.

Contact [email protected] with any concerns.

Resources for use at HL7/CMS FHIR Connectathon, Clinical Reasoning Track.

• Track Description

• Zulip Stream

• CQF-Ruler Docker Container:

docker pull contentgroup/cqf-ruler:develop
docker run -p 8080:8080 contentgroup/cqf-ruler:develop

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM165-FHIR3
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM165-FHIR3

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM165-FHI4
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM165-FHIR4

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM124-FHIR3
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM124-FHIR3

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM124-FHI4
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM124-FHIR4

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM125-FHIR3
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM125-FHIR3

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM125-FHI4
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM125-FHIR4

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM130-FHIR3
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM130-FHIR3

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM130-FHI4
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM130-FHIR4

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM108-FHIR3
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM108-FHIR3

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM108-FHI4
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM108-FHIR4

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM104-FHIR3
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM104-FHIR3

• Measure CQL
• Master Bundle (includes all the Individual bundles)

Individual bundles:

• Measure Bundle
• Terminology Bundle
• Denominator Test Bundle
  • Denominator Patient ID: denom-EXM104-FHI4
• Numerator Test Bundle
  • Numerator Patient ID: numer-EXM104-FHIR4

curl -X POST \
'http:https://3.90.39.179:5000/$import' \
-H 'Accept: application/fhir+json' \
-H 'Content-Type: application/json' \
-H 'Prefer: respond-async' \
-H 'Accept-Encoding: gzip, deflate' \
-H 'Cache-Control: no-cache' \
-H 'Connection: keep-alive' \
-d '{
"inputFormat": "application/fhir+ndjson",
"inputSource": "https://sample.s3.amazonaws.com/",
"storageDetail":
{
"type": "https"
},
"input": [
{
"type": "Patient",
"url": "https://sample.s3.amazonaws.com/Patient.ndjson"
}
]
}'

Example POST for a bulk data import pass-through. The expectation is that the passthrough proxy will post each line in the input file as a POST to the base if the resource type is Bundle, and as a POST to the resource type endpoint if the resource is any other type.

• IDs
  • Context ID (Patient ID): [test name]-[id]-[1]
    • ex: Denom-98ce13ee-450b-43ca-9fbe-08b05999532b-1
  • Child ID: [context id]-[number]
    • ex: Denom-98ce13ee-450b-43ca-9fbe-08b05999532b-2

This repository contains a directory for each supported version of FHIR. Within each FHIR directory, there are directories for CQL source, resources, and tests, according to the following conventions:

• CQL files
  • File names: [library name]-[library version]
    • ex: EXM124_FHIR3-7.2.000.cql
    • note: this must match the library name and version in the CQL content

  |-- fhir3
      |-- cql
          |-- EXM124_FHIR3-7.2.000.cql
          |-- EXM125_FHIR3-7.2.000.cql
  |-- fhir4
      |-- cql
          |-- EXM124_FHIR4-7.2.000.cql
          |-- EXM125_FHIR4-7.2.000.cql

• Test files
  • Root name: tests
  • Library test folder names: [cql library name]
    • ex: EXM124_FHIR3
  • CQL test folder names: [context id]
    • ex: denom-EXM124-FHIR3
    • note: this must match the Context ID for the CQL Library (usually the ID of the Patient resource)
  • Resource folder names: [resource name]
    • ex: Encounter
  • Test file names: [id]
    • ex: denom-EXM124-FHIR3.json
    • note: this must match the id of the resource file

    |-- fhir3
        |-- tests
        |   |-- EXM124_FHIR3-7.2.000
        |   |   |-- denom-EXM124-FHIR3
        |   |   |   |-- Patient
        |   |   |   |   |-- denom-EXM124-FHIR3.json
        |   |   |   |-- Encounter
        |   |   |       |-- denom-EXM124-FHIR3-1.json
        |   |   |-- numer-EXM124-FHIR3
        |   |       |-- Patient
        |   |       |   |-- denom-EXM125-FHIR3.json
        |   |       |-- Encounter
        |   |           |-- denom-EXM125-FHIR3-1.json
        |   |-- EXM125_FHIR3-7.2.000
    |-- fhir4
        |-- tests