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Open-source usearch

C++ 74 8 Updated Jun 16, 2024

Online supplementary for the "Diversity and evolution of the human anellome"

Python 1 Updated Aug 22, 2024

Logan Unitigs and Contigs

85 3 Updated Aug 15, 2024

Robs manual for the computational genomics and bioinformatics class.

HTML 185 56 Updated Sep 12, 2024
Python 1 1 Updated Feb 26, 2021

Scripts, HMMs and search databases for identifying and classifying viral RdRp sequences

Python 6 2 Updated Aug 18, 2024

Download FASTQ files from SRA or ENA repositories.

Python 269 24 Updated Aug 11, 2023

Foldseek enables fast and sensitive comparisons of large structure sets.

C 772 99 Updated Sep 17, 2024

Google Calendar Command Line Interface

Python 3,298 311 Updated Sep 17, 2024

OrViT: (OrthornaVirae Tree) an integrated pipeline for RNA virus taxonomy

Makefile 1 Updated Dec 28, 2023

RoseTTAFold2 protein/nucleic acid complex prediction

Python 319 72 Updated Jun 3, 2024

A beautiful, simple, clean, and responsive Jekyll theme for academics

HTML 10,574 10,949 Updated Sep 13, 2024

🧬 gget enables efficient querying of genomic reference databases

Python 920 73 Updated Sep 15, 2024

Color palette package inspired by National Parks

R 227 4 Updated Jan 21, 2024

Exploring the "dusk matter" of the RNA virosphere

35 5 Updated Mar 25, 2022

Template species interaction data repository compatible with globalbioticinteractions.org

7 22 Updated Feb 7, 2024

Global Biotic Interactions provides access to existing species interaction datasets

Java 122 17 Updated Aug 10, 2024

Analysis of Antarctica sequencing samples contaminated with SARS-CoV-2

Python 4 2 Updated Feb 13, 2022

Profile Readme

1 Updated Jul 12, 2024
Python 21 3 Updated May 13, 2024

A multi-cloud framework for big data analytics and embarrassingly parallel jobs, that provides an universal API for building parallel applications in the cloud ☁️🚀

Python 315 105 Updated Sep 3, 2024
C++ 25 5 Updated May 24, 2023

RNA dependent RNA Polymerase Palmprint Analysis

R 10 5 Updated Aug 1, 2024

Multiple sequence and structure alignment with top benchmark scores scalable to thousands of sequences. Generates replicate alignments, enabling assessment of downstream analyses such as trees and …

C++ 191 22 Updated Sep 12, 2024

A jekyll theme inspired by linux consoles for hackers, developers and script kiddies.

SCSS 682 415 Updated Jul 19, 2024

Generate "Jupiter" plots for circular genomes

Python 2 Updated Nov 29, 2021

The ViennaRNA Package

C 295 76 Updated Sep 8, 2024

The Global Virome in One Network

R 37 8 Updated Aug 22, 2024

HMMER: biological sequence analysis using profile HMMs

C 307 69 Updated Aug 29, 2024
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