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Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal
Intervene: a tool for intersection and visualization of multiple genomic region and gene sets
DeepRegFinder is a deep learning based program used to identify DNA regulatory elements using ChIP-seq
Olink R package: A collection of functions to facilitate analysis of proteomic data from Olink. The goal of this package is to help users extract biological insights from proteomic data run on the …
MOGONET (Multi-Omics Graph cOnvolutional NETworks) is a novel multi-omics data integrative analysis framework for classification tasks in biomedical applications.
✨ My personal website and portfolio. Built using Next.js and deployed on Vercel.
A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.
My settings for Hugo Academic (wowchemy)
Accompanying code for the tutorial: Annotating single cell transcriptomic maps using automated and manual methods
A toolset for handling sequencing data with unique molecular identifiers (UMIs)
This package is a PRobabilistic Enhancer PredictIoN Tool PREPRINT
Tutorials on how to implement a few key architectures for image classification using PyTorch and TorchVision.
Short lessons from FAS Informatics coffee hour
An Introduction to Statistical Learning (James, Witten, Hastie, Tibshirani, 2013): Python code
Script for downloading Coursera.org videos and naming them.