Antibody-Antigen Docking and Affinity Benchmark

Dataset with quantitative binding scores of scFv-format antibodies against SARS-CoV-2 target peptide

Antibody Binding Mutational Database

This repository is the official code source of PPFlow: Target-Aware Peptide Design with Torsional Flow Matching (ICML2024)

FEM是一个基于 Python 实现的有限元方程求解程序，旨在通过有限元方法解决非齐次两点边值问题。它用于近似求解在给定域内的微分方程解。该项目主要利用numpy和scipy库，将域离散化为较小的单元，并使用适当的基函数构建 Ritz-Galerkin 方程。最后分别通过应用高斯消去法和雅可比迭代等数值技术，求解生成的线性方程组。

This repo contains the codes for our paper "Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning" (ICML 2024).

Repository for mRNA Paper and CodonBERT publication.

open source code for Tencent tFold

Official repository for discrete Walk-Jump Sampling (dWJS)

Fast implementation of the edit distance(Levenshtein distance)

Code for ICLR 2024 (Spotlight) paper "MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding"

主要记录大语言大模型（LLMs） 算法（应用）工程师相关的知识及面试题

The official GitHub page for the survey paper "A Survey of Large Language Models".

DeepECtransformer

A network-based method for brain disease gene prediction by integrating brain connectome and molecular network

mPARCE: Protocol for iterative optimization of modified peptides bound to protein targets

Accelerated BLAST compatible local sequence aligner.

S2F: protein function without experiments

A library for graph deep learning research

Dual-core Multi-agent Learning Framework For EC Number Prediction

Deep learning prediction of enzyme optimum pH

A Python package to predict enzyme catalytic optimum temperature with machine learning