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A versatile toolkit for k-mers with taxonomic information

Go 73 7 Updated Jun 8, 2024

Bifrost: Highly parallel construction and indexing of colored and compacted de Bruijn graphs

C++ 199 24 Updated Apr 8, 2024

Flexible and efficient parsing, interpreting and editing of sequencing reads

C 37 Updated Jul 11, 2024

🧬 gget enables efficient querying of genomic reference databases

Python 904 72 Updated Aug 4, 2024

Reusable tools for working with next-generation sequencing (NGS) data

Python 11 6 Updated Nov 22, 2023

A tool to find sequencing data and metadata from public databases.

Python 537 46 Updated Jul 31, 2024