Fix the bug of tensors not on the same device when running on CUDA device

docs/Makefile

@@ -5,6 +5,7 @@
 # from the environment for the first two.
 SPHINXOPTS    ?=
 SPHINXBUILD   ?= sphinx-build
+SPHINXPROJ    = pypots
 SOURCEDIR     = .
 BUILDDIR      = _build
 

docs/conf.py

@@ -10,15 +10,24 @@
 # add these directories to sys.path here. If the directory is relative to the
 # documentation root, use os.path.abspath to make it absolute, like shown here.
 
-from pypots.__version__ import version
+import datetime
+import os
+import sys
+
+try:
+    sys.path.insert(0, os.path.abspath(".."))
+except IndexError:
+    pass
+
+import pypots
 
 # -- Project information -----------------------------------------------------
 project = "PyPOTS"
-copyright = "2023, Wenjie Du"
 author = "Wenjie Du"
+copyright = f"{datetime.datetime.now().year}, {author}"
 
 # The full version, including alpha/beta/rc tags
-release = version
+release = pypots.__version__
 
 # -- General configuration ---------------------------------------------------
 
@@ -32,7 +41,7 @@
     "sphinx.ext.coverage",
     "sphinx.ext.imgmath",
     "sphinx.ext.viewcode",
-    'sphinx.ext.napoleon',  # enables Sphinx to parse both NumPy and Google style docstrings, otherwise no Param/Returns
+    "sphinx.ext.napoleon",  # enables Sphinx to parse both NumPy and Google style docstrings, otherwise no Param/Returns
     "sphinxcontrib.bibtex",
 ]
 

docs/pypots.classification.rst

@@ -11,6 +11,7 @@ pypots.classification.base module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.classification.brits module
 ----------------------------------
@@ -19,6 +20,7 @@ pypots.classification.brits module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.classification.grud module
 ---------------------------------
@@ -27,6 +29,7 @@ pypots.classification.grud module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.classification.raindrop module
 -------------------------------------
@@ -35,6 +38,7 @@ pypots.classification.raindrop module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 Module contents
 ---------------
@@ -43,3 +47,4 @@ Module contents
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:

docs/pypots.clustering.rst

@@ -11,6 +11,7 @@ pypots.clustering.base module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.clustering.crli module
 -----------------------------
@@ -19,6 +20,7 @@ pypots.clustering.crli module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.clustering.vader module
 ------------------------------
@@ -27,6 +29,7 @@ pypots.clustering.vader module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 Module contents
 ---------------
@@ -35,3 +38,4 @@ Module contents
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:

docs/pypots.data.rst

@@ -11,6 +11,7 @@ pypots.data.base module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.data.dataset\_for\_brits module
 --------------------------------------
@@ -19,6 +20,7 @@ pypots.data.dataset\_for\_brits module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.data.dataset\_for\_grud module
 -------------------------------------
@@ -27,6 +29,7 @@ pypots.data.dataset\_for\_grud module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.data.dataset\_for\_mit module
 ------------------------------------
@@ -35,6 +38,7 @@ pypots.data.dataset\_for\_mit module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.data.generating module
 -----------------------------
@@ -43,14 +47,16 @@ pypots.data.generating module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
-pypots.data.integration module
-------------------------------
+pypots.data.load\_preprocessing module
+--------------------------------------
 
-.. automodule:: pypots.data.integration
+.. automodule:: pypots.data.load_preprocessing
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.data.load\_specific\_datasets module
 -------------------------------------------
@@ -59,6 +65,16 @@ pypots.data.load\_specific\_datasets module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
+
+pypots.data.utils module
+------------------------
+
+.. automodule:: pypots.data.utils
+   :members:
+   :undoc-members:
+   :show-inheritance:
+   :inherited-members:
 
 Module contents
 ---------------
@@ -67,3 +83,4 @@ Module contents
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:

docs/pypots.forecasting.rst

@@ -11,6 +11,7 @@ pypots.forecasting.base module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.forecasting.bttf module
 ------------------------------
@@ -19,6 +20,7 @@ pypots.forecasting.bttf module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 Module contents
 ---------------
@@ -27,3 +29,4 @@ Module contents
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:

docs/pypots.imputation.rst

@@ -11,6 +11,7 @@ pypots.imputation.base module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.imputation.brits module
 ------------------------------
@@ -19,6 +20,7 @@ pypots.imputation.brits module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.imputation.locf module
 -----------------------------
@@ -27,6 +29,7 @@ pypots.imputation.locf module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.imputation.saits module
 ------------------------------
@@ -35,6 +38,7 @@ pypots.imputation.saits module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.imputation.transformer module
 ------------------------------------
@@ -43,6 +47,7 @@ pypots.imputation.transformer module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 Module contents
 ---------------
@@ -51,3 +56,4 @@ Module contents
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:

docs/pypots.rst

@@ -24,6 +24,7 @@ pypots.base module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 Module contents
 ---------------
@@ -32,3 +33,4 @@ Module contents
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:

docs/pypots.utils.rst

@@ -1,6 +1,14 @@
 pypots.utils package
 ====================
 
+Subpackages
+-----------
+
+.. toctree::
+   :maxdepth: 4
+
+   pypots.utils.commands
+
 Submodules
 ----------
 
@@ -11,6 +19,7 @@ pypots.utils.files module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.utils.logging module
 ---------------------------
@@ -19,6 +28,7 @@ pypots.utils.logging module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 pypots.utils.metrics module
 ---------------------------
@@ -27,6 +37,7 @@ pypots.utils.metrics module
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:
 
 Module contents
 ---------------
@@ -35,3 +46,4 @@ Module contents
    :members:
    :undoc-members:
    :show-inheritance:
+   :inherited-members:

environment-dev.yml

@@ -7,18 +7,21 @@ channels:
     - nodefaults
 
 dependencies:
-    # basic
-    - conda-forge::python
-    - conda-forge::pip
-    - conda-forge::scipy
-    - conda-forge::numpy >=1.23.3  # numpy should , otherwise may encounter "number not available" when torch>1.11
-    - conda-forge::scikit-learn >=0.24.1
-    - conda-forge::pandas <2.0.0
-    - conda-forge::h5py
-    - conda-forge::tensorboard
-    - conda-forge::pycorruptor
-    - conda-forge::tsdb
-    - pytorch::pytorch >=1.10.0
+    ## basic
+    #- conda-forge::python
+    #- conda-forge::pip
+    #- conda-forge::scipy
+    #- conda-forge::numpy >=1.23.3  # numpy should , otherwise may encounter "number not available" when torch>1.11
+    #- conda-forge::scikit-learn >=0.24.1
+    #- conda-forge::pandas <2.0.0
+    #- conda-forge::h5py
+    #- conda-forge::tensorboard
+    #- conda-forge::pycorruptor
+    #- conda-forge::tsdb
+    #- pytorch::pytorch >=1.10.0
+    ## Below we install the latest pypots because we need pypots-cli in it for development.
+    ## PyPOTS itself already includes all basic dependencies.
+    - conda-forge::pypots
 
     # optional
     - pyg::pyg

pypots/__init__.py

@@ -5,7 +5,7 @@
 # Created by Wenjie Du <[email protected]>
 # License: GPL-v3
 
-from .__version__ import version as __version__
+from pypots.version import __version__
 
 __all__ = [
     "data",