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Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

3,177 975 Updated Oct 1, 2024

A package to help convert different single-cell data formats to each other

R 376 54 Updated Feb 28, 2024

Codes for single-cell meta-data analysis of RMS

R 7 1 Updated Jun 3, 2024

This repository contains the code used to generate figures and perform analysis for the manuscript titled "Transcriptomic and Spatial Proteomic Profiling Reveals the Cellular Composition and Spatia…

Jupyter Notebook 61 18 Updated Oct 9, 2024

A package for automated processing of single cell RNA-seq data in cancer

R 94 41 Updated May 24, 2024

bioinformatics plotting and tools

Python 53 5 Updated Jun 3, 2024