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@WGLab

Wang Genomics Lab

We develop software tools for genome analysis

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  1. doc-ANNOVAR doc-ANNOVAR Public

    Documentation for the ANNOVAR software

    216 322

  2. InterVar InterVar Public

    A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline

    Python 182 92

  3. dragonstar2019 dragonstar2019 Public

    133 98

  4. DeepMod DeepMod Public

    DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications

    Python 96 35

  5. NanoCaller NanoCaller Public

    Variant calling tool for long-read sequencing data

    Python 90 8

  6. PennCNV PennCNV Public

    Copy number vaiation detection from SNP arrays

    C 87 52

Repositories

Showing 10 of 77 repositories
  • Project_Belka Public
    WGLab/Project_Belka’s past year of commit activity
    Jupyter Notebook 2 0 5 0 Updated Jun 20, 2024
  • LongReadSum Public
    WGLab/LongReadSum’s past year of commit activity
    C++ 4 MIT 1 6 1 Updated Jun 20, 2024
  • QuantitativeGenomics2024 Public Forked from WGLab/QuantitativeGenomics2023

    Materials for Quantitative Genomics 2024 workshop

    WGLab/QuantitativeGenomics2024’s past year of commit activity
    0 MIT 1 0 0 Updated Jun 19, 2024
  • Reversal_Curse Public
    WGLab/Reversal_Curse’s past year of commit activity
    Jupyter Notebook 0 MIT 0 0 0 Updated Jun 19, 2024
  • ContextSV Public

    An alignment-based, generalized structural variant caller for long-read sequencing/mapping data

    WGLab/ContextSV’s past year of commit activity
    C++ 1 MIT 0 5 1 Updated Jun 18, 2024
  • doc-ANNOVAR Public

    Documentation for the ANNOVAR software

    WGLab/doc-ANNOVAR’s past year of commit activity
    216 322 113 0 Updated Jun 17, 2024
  • LIQA Public

    Long-read Isoform Quantification and Analysis

    WGLab/LIQA’s past year of commit activity
    Python 37 12 0 0 Updated Jun 12, 2024
  • PhenoSS Public
    WGLab/PhenoSS’s past year of commit activity
    0 MIT 0 0 0 Updated Jun 10, 2024
  • DELongSeq Public
    WGLab/DELongSeq’s past year of commit activity
    Python 7 0 0 0 Updated Jun 2, 2024
  • NanoRepeat Public

    NanoRepeat: fast and accurate analysis of Short Tandem Repeats (STRs) from Oxford Nanopore sequencing data

    WGLab/NanoRepeat’s past year of commit activity
    Python 15 MIT 1 3 0 Updated Jun 1, 2024
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