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1. scImpute scImpute Public

   Accurate and robust imputation of scRNA-seq data

   R 92 34

2. AIDE AIDE Public

   AIDE: annotation-assisted isoform discovery and quantification from RNA-seq data

   R 14 5

3. scDesign scDesign Public

   A statistical simulator for rational scRNA-seq experimental design

   R 11 4

4. scLink scLink Public

   Inferring gene co-expression networks from single cell gene expression data

   R 24 7

5. MAAPER MAAPER Public

   Model-based analysis of APA using 3' end-linked reads

   R 6 4

6. scINSIGHT scINSIGHT Public

   Matrix factorization model for interpreting single cell gene expression in biologically heterogeneous data

   C++ 20 2