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- Worcester Polytechnic Institute
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Data Analysis Automation
automatic feature extraction, model selection, hyperparameter/model optimization, & moreData Repos
docuseries
Image Related Repos
make brain make sense
Neuro Signal Processing
obsidean plugins
Open Source Stimulation
Starred repositories
Analysis scripts for FRAP analysis
👓 A 3D graph for Obsidian!
Quickly insert and change latex environments within math blocks in Obsidian.
Adaptive Platform for Neuroscience Experiments
High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn
Computations and statistics on manifolds with geometric structures.
An Explainable Geometric-Weighted Graph Attention Network (xGW-GAT) for Identifying Functional Networks Associated with Gait Impairment
Matlab Source Code for Longitudinal ICA applied to longitudinal rs-fMRI analysis
Repository for our paper "Bridging the Gap Between Deep Learning and Hypothesis-Driven Analysis via Permutation Testing" published at the PRIME Workshop at MICCAI 2022.
A game theoretic approach to explain the output of any machine learning model.
Official outputs from the RDA DMP Common Standards WG
A Zotero plugin for syncing items and notes into Notion
Everything about note management. All in Zotero.
Zotero plugin providing some additional editing features
Declarative statistical visualization library for Python
Code repository for functional screening of modulators of neural activity in living organisms
Curated list of project-based tutorials
A toolkit for developing and comparing reinforcement learning algorithms.
Data and code behind the articles and graphics at FiveThirtyEight
Python samples for Micro-Manager: image acquisition and microscope control system
Analysis pipeline for electrophysiology MiV-system and simulator
Gramm is a complete data visualization toolbox for Matlab. It provides an easy to use and high-level interface to produce publication-quality plots of complex data with varied statistical visualiza…
This workflow detects spots in a 2D image by filtering the image by Laplacian of Gaussian (user defined radius) and detecting regional intensity minima (user defined noise tolerance).