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Resources associated with "Applied Multivariate Statistics in R" pressbook
A great intro dataset for data exploration & visualization (alternative to iris).
Automated flagging of common spatial and temporal errors in biological and palaeontological collection data, for the use in conservation, ecology and palaeontology.
The `crest4` python package can automatically assign taxonomic names to DNA sequences obtained from environmental sequencing.
This repository contains exemplary workflow using programming tools and libraries for data rescue of historical biodiversity data. These tools combine OCR and text mining approaches to retrieve val…
MapofLife / MOL
Forked from andrewxhill/MOLIntegrating information about species distributions in an effort to support global understanding of the world's biodiversity.
High dimensional geometry operations - (hypervolume R package)
GNfinder finds scientific names in UTF8 texts, PDF files, MS Word/Excel documents, URLs etc.
R Shiny Contest 2021 submission
A package for calculating indices for biomonitoring of running waters with a focus on macroinvertebrate community. Still in development.
Network analysis and visualization workshop for the vCIES2020
R package with a miscellanea of functions to help in the development of species distribution models
Material for a niche model course I teach in GBIF.es every year.
World Geographical Scheme for Recording Plant Distributions (WGSRPD)
Optima and tolerance calculator for species (using environmental variables)
The blockCV package creates spatially or environmentally separated training and testing folds for cross-validation to provide a robust error estimation in spatially structured environments. See
A collection of functions for calculating the italian STAR_ICMi index based on macroinvertebrate community.