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A latent text-to-image diffusion model
dandelion - A single cell BCR/TCR V(D)J-seq analysis package for 10X Chromium 5' data
为GPT/GLM等LLM大语言模型提供实用化交互接口，特别优化论文阅读/润色/写作体验，模块化设计，支持自定义快捷按钮&函数插件，支持Python和C++等项目剖析&自译解功能，PDF/LaTex论文翻译&总结功能，支持并行问询多种LLM模型，支持chatglm3等本地模型。接入通义千问, deepseekcoder, 讯飞星火, 文心一言, llama2, rwkv, claude2, m…
Code for Klunk, Vilgalys, et al. 2022, Nature
This package contains deep learning models and related scripts for RoseTTAFold
Code and data used in https://doi.org/10.1101/2021.08.01.454656
Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
A scanpy extension to analyse single-cell TCR and BCR data.
Single-cell analysis in Python. Scales to >1M cells.
Deep probabilistic analysis of single-cell and spatial omics data
Python package and command line tool for epitope prediction
Neoantigens prediction pipeline for multi- or single-region vcf files using ANNOVAR and netMHCpan.
🧬 Immunarch: an R Package for Fast and Painless Exploration of Single-cell and Bulk T-cell/Antibody Immune Repertoires
🦠 Regularly updated list of publicly available datasets with single-cell (scRNAseq) and T-cell/antibody immune repertoire (AIRR / RepSeq / immunosequencing) data of COVID-19 patients with SARS-CoV-2.
A toolkit for single-cell immune profiling
Detecting TCR involved in immune responses from single RepSeq datasets
100-Days-Of-ML-Code中文版
Generic TCR-epitope recognition prediction using CNN approach on both known and novel epitopes
ST Pipeline contains the tools and scripts needed to process and analyze the raw files generated with the Spatial Transcriptomics method in FASTQ format.
R package to BLAST peptide sequences against each other and identify the minimal overlap of aligning regions.
Deep Learning Methods for Parsing T-Cell Receptor Sequencing (TCRSeq) Data