A package to calculate heterozygosity, Fst and make plots about them.

This package can calculate the Fst and heterozygosity value in different cases, and make the triangle plots about them. The main functions are get.Fst.admix.general, get.Hadm.admix.general and plot_HorF; please see the corresponding help files for details, as well as the companion paper:

Boca, S. M., & Rosenberg, N. A. (2011). Mathematical properties of Fst between admixed populations and their parental source populations. Theoretical population biology, 80(3), 208-216.

To install the package in R, first install the devtools package, and then use the commands

library(devtools)
install_github('AI1013/popadmix-pkg', subdir="R_pkg/")