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snakemake Public
Forked from snakemake/snakemakeThis is the development home of the workflow management system Snakemake. For general information, see
HTML MIT License UpdatedMar 3, 2024 -
FAANG_IsoSeq Public
IsoSeq pipeline used in equine FAANG project
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atac-seq Public
Snakemake workflow for ATAC-seq analysis
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deepTools Public
Forked from deeptools/deepToolsTools to process and analyze deep sequencing data.
Python Other UpdatedApr 10, 2022 -
SQANTI3 Public
Forked from ConesaLab/SQANTI3Repository of SQANTI3 tool for Quality Control of Long-Read Defined Transcriptomes
HTML GNU General Public License v3.0 UpdatedMar 2, 2022 -
cDNA_Cupcake Public
Forked from Magdoll/cDNA_CupcakeMiscellaneous collection of Python and R scripts for processing Iso-Seq data
Python BSD 3-Clause Clear License UpdatedFeb 28, 2022 -
gffutils Public
Forked from daler/gffutilsGFF and GTF file manipulation and interconversion
Python MIT License UpdatedFeb 8, 2022 -
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UpSetPlot Public
Forked from jnothman/UpSetPlotDraw UpSet plots with Matplotlib
Python Other UpdatedJun 6, 2021 -
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VariantFrequency Public
Search for variant in ENA/SRA to determine allele frequency
Python UpdatedApr 12, 2021 -
2021-03-22-genentech-online Public
Workshop website for March 2021 Genentech workshop
HTML Other UpdatedFeb 23, 2021 -
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FAANG_ATACseq Public
ATACseq analysis pipeline for equine FAANG
Jupyter Notebook UpdatedNov 12, 2020 -
scaffolds Public
Forked from carpentries/scaffoldsWIP On-demand environments for learners who were unable to install software
1 UpdatedAug 7, 2020 -
2020-08-03-merck-online Public
Forked from dwinston/2020-08-03-merck-onlineData Carpentry workshop for Merck & Co., Inc.
HTML Other UpdatedJul 26, 2020 -
SalmonTools Public
Forked from COMBINE-lab/SalmonToolsUseful tools for working with Salmon output
C++ BSD 3-Clause "New" or "Revised" License UpdatedJun 24, 2020 -
NASA_APOD_WP Public
Set Astronomy Picture Of the Day (APOD) as wallpaper on ubuntu
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openrefineder Public
Forked from betatim/openrefineder💠 + 📚 OpenRefine on Binder!
Jupyter Notebook Other UpdatedAug 23, 2019 -
ezProtocol Public
A script writer for opentrons OT-2
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sambamba Public
Forked from biod/sambambaTools for working with SAM/BAM/CRAM data
D GNU General Public License v2.0 UpdatedAug 5, 2019 -
angus Public
Forked from ngs-docs/angusMaterials for Analyzing Next-Generation Sequencing (ANGUS) course.
HTML UpdatedJul 4, 2019 -
EVA_Instrumentality Public archive
The lark's on the wing; The snail's on the thorn; God's in his heaven— All's right with the world!
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functional-annotation Public
Forked from kernco/functional-annotationPipeline for functional annotation of genomes by integrating data from RNA-seq, ChIP-seq, DNase-seq, etc.
Python UpdatedNov 13, 2018 -