iDeep: integrated prediction of RNA-protein binding sites using deep learning

Resources (software, data, research article) in the field of statistical genetics

We design a method for heritability estimation, namely LD Eigenvalue Regression (LDER), which extends the LDSC method and provides more accurate estimates of heritability and confounding inflation.

SV clustering

Online single-cell data integration through projecting heterogeneous datasets into a common cell-embedding space

Ultrafast Sample Placement on Existing Trees

Nextstrain build for novel coronavirus SARS-CoV-2

Deep mutational scanning of the receptor-binding domain of SARS-CoV-2 Spike

Yet another redundant workflow engine

Organize your project into a research website

Multi-omics integrative analysis of lung adenocarcinoma

🧠 A study guide to learn about Transformers

Framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data

Repo for the R package coloc

Multi-omics integrative analysis of lung adenocarcinoma

display user feedback next to Shiny inputs

Explore the cancer relevance of your gene list

Comprehensive Python Cheatsheet

Network Medicine Workshop

Example of data set of chromosome 1 (subsample of 1000G : position on chromosome 1 for dna cheap h3africa) for GWAS with phe

Ten Quick Tips for Deep Learning in Biology

❗ This is a read-only mirror of the CRAN R package repository. glmnet — Lasso and Elastic-Net Regularized Generalized Linear Models. Homepage: https://glmnet.stanford.edu

customizable pipeline to identify viral sequences from (meta)genomic data

GCTA software

phenoscanner allows users to query the PhenoScanner database of genotype-phenotype associations from inside R

renv: Project environments for R.

A Bioconductor package to retrieve and analyze data from the Human Protein Atlas